Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Scfd1Q8BRF7 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Gm11509-201ENSMUST00000117358 325 ntBASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Gm11941-201ENSMUST00000119904 610 ntBASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Gm4482-201ENSMUST00000200876 742 ntBASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Gm9555-201ENSMUST00000200908 583 ntBASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scfd1Q8BRF7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scfd1Q8BRF7 Gm37131-201ENSMUST00000192502 1561 ntBASIC14□□□□□ -0.17
Scfd1Q8BRF7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scfd1Q8BRF7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scfd1Q8BRF7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Scfd1Q8BRF7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scfd1Q8BRF7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scfd1Q8BRF7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms