Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Gm6108-201ENSMUST00000208365 367 ntBASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Gm9796-201ENSMUST00000062249 2250 ntBASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col16a1Q8BLX7 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Gm10807-201ENSMUST00000177134 795 ntBASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Gm37981-201ENSMUST00000194280 535 ntBASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Gm18706-201ENSMUST00000210053 1066 ntBASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col16a1Q8BLX7 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Gm12218-201ENSMUST00000117666 399 ntBASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Gm15172-201ENSMUST00000118945 1046 ntBASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Gm12783-201ENSMUST00000121425 397 ntBASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Gm3726-201ENSMUST00000203110 785 ntBASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Mt1-202ENSMUST00000211807 1085 ntBASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 CT009536.2-201ENSMUST00000225370 665 ntBASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col16a1Q8BLX7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Gm18201-201ENSMUST00000174735 875 ntBASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Gm26989-201ENSMUST00000182608 749 ntBASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Gm18968-201ENSMUST00000221319 862 ntBASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 AC129308.3-201ENSMUST00000225652 524 ntBASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms