Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Gm12138-201ENSMUST00000122180 951 ntBASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Gm23119-201ENSMUST00000158610 140 ntBASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Gm8018-201ENSMUST00000173536 789 ntBASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Gm18304-201ENSMUST00000189162 546 ntBASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Gm6007-201ENSMUST00000208170 823 ntBASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdhr3Q8BL00 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Gm9083-201ENSMUST00000120423 819 ntBASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Gm9002-201ENSMUST00000178437 499 ntBASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Gm27847-201ENSMUST00000183711 107 ntBASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Gm27375-201ENSMUST00000183799 107 ntBASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cdhr3Q8BL00 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdhr3Q8BL00 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms