Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12□□□□□ -0.49
Trim50Q810I2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12□□□□□ -0.49
Trim50Q810I2 Gm2673-201ENSMUST00000120958 1608 ntBASIC12□□□□□ -0.49
Trim50Q810I2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12□□□□□ -0.49
Trim50Q810I2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim50Q810I2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
Trim50Q810I2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim50Q810I2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
Trim50Q810I2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Gm25214-201ENSMUST00000104573 129 ntBASIC11.99□□□□□ -0.49
Trim50Q810I2 Gm11531-201ENSMUST00000117614 555 ntBASIC11.99□□□□□ -0.49
Trim50Q810I2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim50Q810I2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim50Q810I2 Gm42937-201ENSMUST00000197360 752 ntBASIC11.99□□□□□ -0.49
Trim50Q810I2 Gm45331-201ENSMUST00000209868 554 ntBASIC11.99□□□□□ -0.49
Trim50Q810I2 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.99□□□□□ -0.49
Trim50Q810I2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim50Q810I2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.99□□□□□ -0.49
Trim50Q810I2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim50Q810I2 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.99□□□□□ -0.49
Trim50Q810I2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.99□□□□□ -0.49
Trim50Q810I2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim50Q810I2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim50Q810I2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Cog3-203ENSMUST00000227473 4197 ntBASIC11.99□□□□□ -0.49
Trim50Q810I2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim50Q810I2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim50Q810I2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.98□□□□□ -0.49
Trim50Q810I2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.98□□□□□ -0.49
Trim50Q810I2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim50Q810I2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Gm44958-201ENSMUST00000203734 736 ntBASIC11.98□□□□□ -0.49
Trim50Q810I2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim50Q810I2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim50Q810I2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms