Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Usp6nlQ80XC3 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Gm24891-201ENSMUST00000104391 136 ntBASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Gm8100-201ENSMUST00000182906 988 ntBASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Gm4607-201ENSMUST00000206649 577 ntBASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Gm4157-201ENSMUST00000211647 679 ntBASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.59□□□□□ -0.23
Usp6nlQ80XC3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Usp6nlQ80XC3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Usp6nlQ80XC3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Usp6nlQ80XC3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Usp6nlQ80XC3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Usp6nlQ80XC3 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Gm12857-201ENSMUST00000117678 592 ntBASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Gm7722-201ENSMUST00000120646 741 ntBASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Rprl1-201ENSMUST00000158050 327 ntBASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Gm6905-201ENSMUST00000205729 511 ntBASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Usp6nlQ80XC3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms