Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp8Q80U87 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Gm9630-201ENSMUST00000178304 885 ntBASIC12.38□□□□□ -0.43
Usp8Q80U87 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.38□□□□□ -0.43
Usp8Q80U87 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.38□□□□□ -0.43
Usp8Q80U87 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Usp8Q80U87 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp8Q80U87 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Gm15703-201ENSMUST00000120250 880 ntBASIC12.37□□□□□ -0.43
Usp8Q80U87 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.37□□□□□ -0.43
Usp8Q80U87 Gm14760-201ENSMUST00000121831 999 ntBASIC12.37□□□□□ -0.43
Usp8Q80U87 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.37□□□□□ -0.43
Usp8Q80U87 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.37□□□□□ -0.43
Usp8Q80U87 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Gm29127-201ENSMUST00000188304 517 ntBASIC12.37□□□□□ -0.43
Usp8Q80U87 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Gm44124-201ENSMUST00000204159 472 ntBASIC12.37□□□□□ -0.43
Usp8Q80U87 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.37□□□□□ -0.43
Usp8Q80U87 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.37□□□□□ -0.43
Usp8Q80U87 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp8Q80U87 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp8Q80U87 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Usp8Q80U87 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Usp8Q80U87 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Usp8Q80U87 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.36□□□□□ -0.43
Usp8Q80U87 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Usp8Q80U87 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.36□□□□□ -0.43
Usp8Q80U87 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Usp8Q80U87 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp8Q80U87 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Usp8Q80U87 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.36□□□□□ -0.43
Usp8Q80U87 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp8Q80U87 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp8Q80U87 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Usp8Q80U87 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms