Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.47□□□□□ -0.57
Pif1Q80SX8 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.46□□□□□ -0.57
Pif1Q80SX8 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm23757-201ENSMUST00000158353 100 ntBASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm17040-202ENSMUST00000170597 889 ntBASIC11.46□□□□□ -0.57
Pif1Q80SX8 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm8502-201ENSMUST00000185708 901 ntBASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm21147-201ENSMUST00000186046 913 ntBASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm8510-201ENSMUST00000189202 895 ntBASIC11.46□□□□□ -0.57
Pif1Q80SX8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm2316-201ENSMUST00000190613 921 ntBASIC11.46□□□□□ -0.57
Pif1Q80SX8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm44100-201ENSMUST00000204329 436 ntBASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.46□□□□□ -0.57
Pif1Q80SX8 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.46□□□□□ -0.57
Pif1Q80SX8 Gm39404-201ENSMUST00000216350 313 ntBASIC11.46□□□□□ -0.57
Pif1Q80SX8 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.46□□□□□ -0.57
Pif1Q80SX8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pif1Q80SX8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.46□□□□□ -0.58
Pif1Q80SX8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Pif1Q80SX8 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pif1Q80SX8 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm43488-201ENSMUST00000198874 2504 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm13611-201ENSMUST00000118269 318 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pif1Q80SX8 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.45□□□□□ -0.58
Pif1Q80SX8 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms