Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 AY702102-202ENSMUST00000194651 1173 ntBASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Gm43630-201ENSMUST00000201550 776 ntBASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ctdp1Q7TSG2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Gm22331-201ENSMUST00000158066 136 ntBASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Gm8810-201ENSMUST00000172895 754 ntBASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ctdp1Q7TSG2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Gm11618-201ENSMUST00000117946 267 ntBASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Mir1982-201ENSMUST00000157368 74 ntBASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Gm45784-201ENSMUST00000188360 142 ntBASIC13.41□□□□□ -0.26
Ctdp1Q7TSG2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms