Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Gm8566-201ENSMUST00000120174 465 ntBASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Gm3332-201ENSMUST00000189337 928 ntBASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Gm43916-201ENSMUST00000205062 967 ntBASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Gm44551-201ENSMUST00000208804 171 ntBASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Ginm1-202ENSMUST00000065124 300 ntBASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6aQ78XR0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Gm10288-201ENSMUST00000084614 537 ntBASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6aQ78XR0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms