Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.42□□□□□ -0.74
Rif1Q6PR54 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Gm22133-201ENSMUST00000102082 109 ntBASIC10.42□□□□□ -0.74
Rif1Q6PR54 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Gm26448-201ENSMUST00000082446 203 ntBASIC10.42□□□□□ -0.74
Rif1Q6PR54 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.42□□□□□ -0.74
Rif1Q6PR54 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.42□□□□□ -0.74
Rif1Q6PR54 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Gm3635-201ENSMUST00000212314 354 ntBASIC10.42□□□□□ -0.74
Rif1Q6PR54 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.42□□□□□ -0.74
Rif1Q6PR54 Rps3a3-201ENSMUST00000074680 795 ntBASIC10.42□□□□□ -0.74
Rif1Q6PR54 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC10.42□□□□□ -0.74
Rif1Q6PR54 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.41□□□□□ -0.74
Rif1Q6PR54 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Gm22711-201ENSMUST00000116890 133 ntBASIC10.41□□□□□ -0.74
Rif1Q6PR54 Gm11836-201ENSMUST00000121022 441 ntBASIC10.41□□□□□ -0.74
Rif1Q6PR54 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.41□□□□□ -0.74
Rif1Q6PR54 Gm9081-201ENSMUST00000182346 991 ntBASIC10.41□□□□□ -0.74
Rif1Q6PR54 Gm9022-201ENSMUST00000182482 992 ntBASIC10.41□□□□□ -0.74
Rif1Q6PR54 Gm4654-201ENSMUST00000183305 982 ntBASIC10.41□□□□□ -0.74
Rif1Q6PR54 Gm38135-201ENSMUST00000195068 502 ntBASIC10.41□□□□□ -0.74
Rif1Q6PR54 AC129017.2-201ENSMUST00000226118 1284 ntBASIC10.41□□□□□ -0.74
Rif1Q6PR54 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms