Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Gm11340-201ENSMUST00000119226 412 ntBASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Gm12516-201ENSMUST00000120819 385 ntBASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Gm23771-201ENSMUST00000178702 110 ntBASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Snrnp40Q6PE01 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Gm11451-201ENSMUST00000118946 630 ntBASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Mir1901-201ENSMUST00000122616 78 ntBASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Gm18893-201ENSMUST00000198416 943 ntBASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 AC124457.1-201ENSMUST00000198845 120 ntBASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Gm9797-202ENSMUST00000218003 294 ntBASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Snrnp40Q6PE01 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Snrnp40Q6PE01 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms