Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Gm15321-201ENSMUST00000121290 288 ntBASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Gm12151-201ENSMUST00000121374 290 ntBASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Gm5354-201ENSMUST00000182417 973 ntBASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Gm28760-201ENSMUST00000185995 736 ntBASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf220Q6PDX6 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Rnf220Q6PDX6 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rnf220Q6PDX6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.65□□□□□ -0.55
Rnf220Q6PDX6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rnf220Q6PDX6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Rnf220Q6PDX6 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rnf220Q6PDX6 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rnf220Q6PDX6 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf220Q6PDX6 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms