Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Gm11331-201ENSMUST00000119764 288 ntBASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Gm807-202ENSMUST00000224929 408 ntBASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt40Q6IFX3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Gm20426-201ENSMUST00000173657 440 ntBASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Gm5706-201ENSMUST00000181525 993 ntBASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Gm4482-201ENSMUST00000200876 742 ntBASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.41□□□□□ -0.1
Krt40Q6IFX3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Gm14058-201ENSMUST00000116082 735 ntBASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Gm12857-201ENSMUST00000117678 592 ntBASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Gm12501-201ENSMUST00000119163 529 ntBASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Gm23699-201ENSMUST00000158835 135 ntBASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Spcs1-203ENSMUST00000226374 592 ntBASIC14.4□□□□□ -0.1
Krt40Q6IFX3 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Gm5705-201ENSMUST00000066241 711 ntBASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt40Q6IFX3 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.4□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms