Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Gm21778-201ENSMUST00000178779 471 ntBASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Gm45135-201ENSMUST00000206787 1184 ntBASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Gm8436-201ENSMUST00000210152 1080 ntBASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Gm5749-201ENSMUST00000210673 1090 ntBASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Gm6170-201ENSMUST00000187672 1388 ntBASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarca2Q6DIC0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Smarca2Q6DIC0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smarca2Q6DIC0 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Smarca2Q6DIC0 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Gm38089-201ENSMUST00000193585 1514 ntBASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Gm11619-201ENSMUST00000117474 237 ntBASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Gm5700-201ENSMUST00000191483 989 ntBASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarca2Q6DIC0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarca2Q6DIC0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Smarca2Q6DIC0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smarca2Q6DIC0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC21■□□□□ 0.95
Smarca2Q6DIC0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smarca2Q6DIC0 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC21■□□□□ 0.95
Smarca2Q6DIC0 Gm12906-201ENSMUST00000154610 441 ntBASIC21■□□□□ 0.95
Smarca2Q6DIC0 Gm22846-201ENSMUST00000157706 270 ntBASIC21■□□□□ 0.95
Smarca2Q6DIC0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC21■□□□□ 0.95
Smarca2Q6DIC0 Gm43854-201ENSMUST00000200418 394 ntBASIC21■□□□□ 0.95
Smarca2Q6DIC0 Gm45085-201ENSMUST00000209100 441 ntBASIC21■□□□□ 0.95
Smarca2Q6DIC0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Smarca2Q6DIC0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarca2Q6DIC0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Gm12179-201ENSMUST00000118344 1272 ntBASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Gm5909-201ENSMUST00000119768 1281 ntBASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Gm17709-201ENSMUST00000174536 1096 ntBASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarca2Q6DIC0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarca2Q6DIC0 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Smarca2Q6DIC0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smarca2Q6DIC0 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Smarca2Q6DIC0 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Smarca2Q6DIC0 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Smarca2Q6DIC0 Gm18801-201ENSMUST00000186616 536 ntBASIC20.98■□□□□ 0.95
Smarca2Q6DIC0 Trav11n-201ENSMUST00000200113 343 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms