Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn9aQ62205 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scn9aQ62205 Map1b-203ENSMUST00000223725 2669 ntBASIC14.21□□□□□ -0.14
Scn9aQ62205 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Scn9aQ62205 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn9aQ62205 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn9aQ62205 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn9aQ62205 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn9aQ62205 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.2□□□□□ -0.14
Scn9aQ62205 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Gm22146-201ENSMUST00000157397 288 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 Gm43852-201ENSMUST00000202098 917 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 Gm6108-201ENSMUST00000208365 367 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 AC153962.2-201ENSMUST00000219417 550 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC14.2□□□□□ -0.14
Scn9aQ62205 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Scn9aQ62205 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Scn9aQ62205 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Gm5641-201ENSMUST00000091130 1488 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scn9aQ62205 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.2□□□□□ -0.14
Scn9aQ62205 Gm18561-201ENSMUST00000206027 804 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC14.2□□□□□ -0.14
Scn9aQ62205 n-R5s185-201ENSMUST00000083953 119 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scn9aQ62205 Olfr584-201ENSMUST00000098210 964 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.2□□□□□ -0.14
Scn9aQ62205 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn9aQ62205 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.19□□□□□ -0.14
Scn9aQ62205 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Scn9aQ62205 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scn9aQ62205 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.19□□□□□ -0.14
Scn9aQ62205 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Scn9aQ62205 Gm13019-201ENSMUST00000120000 276 ntBASIC14.19□□□□□ -0.14
Scn9aQ62205 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Gm20414-201ENSMUST00000172918 646 ntBASIC14.19□□□□□ -0.14
Scn9aQ62205 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.19□□□□□ -0.14
Scn9aQ62205 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scn9aQ62205 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Scn9aQ62205 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.19□□□□□ -0.14
Scn9aQ62205 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.19□□□□□ -0.14
Scn9aQ62205 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Scn9aQ62205 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Scn9aQ62205 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn9aQ62205 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scn9aQ62205 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Gm15615-201ENSMUST00000118876 198 ntBASIC14.18□□□□□ -0.14
Scn9aQ62205 Gm24248-201ENSMUST00000157321 322 ntBASIC14.18□□□□□ -0.14
Scn9aQ62205 Gm17070-201ENSMUST00000170463 784 ntBASIC14.18□□□□□ -0.14
Scn9aQ62205 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scn9aQ62205 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Scn9aQ62205 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.18□□□□□ -0.14
Scn9aQ62205 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Gm45592-201ENSMUST00000209605 1043 ntBASIC14.18□□□□□ -0.14
Scn9aQ62205 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms