Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm8385-201ENSMUST00000058999 643 ntBASIC12.81□□□□□ -0.36
Smarcd1Q61466 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.8□□□□□ -0.36
Smarcd1Q61466 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.8□□□□□ -0.36
Smarcd1Q61466 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Gm11439-201ENSMUST00000118598 409 ntBASIC12.8□□□□□ -0.36
Smarcd1Q61466 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Gm24990-201ENSMUST00000157406 323 ntBASIC12.8□□□□□ -0.36
Smarcd1Q61466 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.8□□□□□ -0.36
Smarcd1Q61466 Gm27627-201ENSMUST00000183644 150 ntBASIC12.8□□□□□ -0.36
Smarcd1Q61466 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.8□□□□□ -0.36
Smarcd1Q61466 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Gm5363-201ENSMUST00000211927 938 ntBASIC12.8□□□□□ -0.36
Smarcd1Q61466 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.8□□□□□ -0.36
Smarcd1Q61466 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd1Q61466 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm14277-201ENSMUST00000121195 360 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm29615-201ENSMUST00000185371 697 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm28224-201ENSMUST00000186078 697 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm29001-201ENSMUST00000186177 697 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm28292-201ENSMUST00000186593 697 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm28101-201ENSMUST00000187608 697 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm29076-201ENSMUST00000187689 697 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm28302-201ENSMUST00000187931 697 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm28646-201ENSMUST00000188220 697 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm28205-201ENSMUST00000189177 697 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm29032-201ENSMUST00000189797 697 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm28695-201ENSMUST00000190300 697 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm37448-201ENSMUST00000192795 697 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm43962-201ENSMUST00000203898 190 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.79□□□□□ -0.36
Smarcd1Q61466 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smarcd1Q61466 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smarcd1Q61466 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd1Q61466 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms