Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Vsx2Q61412 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.02□□□□□ -0.49
Vsx2Q61412 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.01□□□□□ -0.49
Vsx2Q61412 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.01□□□□□ -0.49
Vsx2Q61412 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Vsx2Q61412 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vsx2Q61412 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vsx2Q61412 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.01□□□□□ -0.49
Vsx2Q61412 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.01□□□□□ -0.49
Vsx2Q61412 Gm6621-201ENSMUST00000193251 772 ntBASIC12.01□□□□□ -0.49
Vsx2Q61412 Gm44405-201ENSMUST00000198952 126 ntBASIC12.01□□□□□ -0.49
Vsx2Q61412 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.01□□□□□ -0.49
Vsx2Q61412 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.01□□□□□ -0.49
Vsx2Q61412 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.01□□□□□ -0.49
Vsx2Q61412 Gm45925-201ENSMUST00000218882 744 ntBASIC12.01□□□□□ -0.49
Vsx2Q61412 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.01□□□□□ -0.49
Vsx2Q61412 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vsx2Q61412 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Vsx2Q61412 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.01□□□□□ -0.49
Vsx2Q61412 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Vsx2Q61412 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.01□□□□□ -0.49
Vsx2Q61412 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx2Q61412 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Gm13722-201ENSMUST00000117964 3066 ntBASIC12□□□□□ -0.49
Vsx2Q61412 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vsx2Q61412 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12□□□□□ -0.49
Vsx2Q61412 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vsx2Q61412 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12□□□□□ -0.49
Vsx2Q61412 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12□□□□□ -0.49
Vsx2Q61412 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12□□□□□ -0.49
Vsx2Q61412 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vsx2Q61412 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vsx2Q61412 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12□□□□□ -0.49
Vsx2Q61412 Gm8176-201ENSMUST00000191297 1099 ntBASIC12□□□□□ -0.49
Vsx2Q61412 Gm19817-201ENSMUST00000199764 2132 ntBASIC12□□□□□ -0.49
Vsx2Q61412 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Gm45865-201ENSMUST00000211815 945 ntBASIC12□□□□□ -0.49
Vsx2Q61412 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12□□□□□ -0.49
Vsx2Q61412 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vsx2Q61412 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 Gm7104-201ENSMUST00000179741 2532 ntBASIC12□□□□□ -0.49
Vsx2Q61412 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx2Q61412 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms