Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six4Q61321 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six4Q61321 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six4Q61321 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six4Q61321 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.4□□□□□ -0.42
Six4Q61321 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six4Q61321 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six4Q61321 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six4Q61321 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six4Q61321 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.4□□□□□ -0.42
Six4Q61321 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six4Q61321 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Six4Q61321 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Six4Q61321 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.4□□□□□ -0.43
Six4Q61321 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Six4Q61321 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Six4Q61321 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Six4Q61321 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Six4Q61321 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.39□□□□□ -0.43
Six4Q61321 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.39□□□□□ -0.43
Six4Q61321 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.39□□□□□ -0.43
Six4Q61321 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Gm27320-201ENSMUST00000184892 109 ntBASIC12.39□□□□□ -0.43
Six4Q61321 Gm38317-201ENSMUST00000195564 343 ntBASIC12.39□□□□□ -0.43
Six4Q61321 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.39□□□□□ -0.43
Six4Q61321 Gm45224-201ENSMUST00000208203 414 ntBASIC12.39□□□□□ -0.43
Six4Q61321 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.39□□□□□ -0.43
Six4Q61321 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.39□□□□□ -0.43
Six4Q61321 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Six4Q61321 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.39□□□□□ -0.43
Six4Q61321 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Six4Q61321 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six4Q61321 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.38□□□□□ -0.43
Six4Q61321 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.38□□□□□ -0.43
Six4Q61321 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.38□□□□□ -0.43
Six4Q61321 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Six4Q61321 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Six4Q61321 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Six4Q61321 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Six4Q61321 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Six4Q61321 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Six4Q61321 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.38□□□□□ -0.43
Six4Q61321 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.38□□□□□ -0.43
Six4Q61321 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.38□□□□□ -0.43
Six4Q61321 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.38□□□□□ -0.43
Six4Q61321 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.38□□□□□ -0.43
Six4Q61321 Gm44967-201ENSMUST00000207047 631 ntBASIC12.38□□□□□ -0.43
Six4Q61321 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.38□□□□□ -0.43
Six4Q61321 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.38□□□□□ -0.43
Six4Q61321 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.38□□□□□ -0.43
Six4Q61321 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.38□□□□□ -0.43
Six4Q61321 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.38□□□□□ -0.43
Six4Q61321 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Six4Q61321 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms