Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col11a1Q61245 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col11a1Q61245 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.49□□□□□ -0.25
Col11a1Q61245 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Col11a1Q61245 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col11a1Q61245 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col11a1Q61245 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Gm14395-201ENSMUST00000120494 563 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 Gm8197-202ENSMUST00000193422 934 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 Gm43752-201ENSMUST00000198475 697 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.48□□□□□ -0.25
Col11a1Q61245 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col11a1Q61245 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col11a1Q61245 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Col11a1Q61245 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col11a1Q61245 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.48□□□□□ -0.25
Col11a1Q61245 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Gm9673-201ENSMUST00000119287 781 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.48□□□□□ -0.25
Col11a1Q61245 Gm43671-201ENSMUST00000200422 433 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.48□□□□□ -0.25
Col11a1Q61245 CT030652.1-201ENSMUST00000227377 1235 ntBASIC13.48□□□□□ -0.25
Col11a1Q61245 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col11a1Q61245 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.47□□□□□ -0.25
Col11a1Q61245 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Gm18801-201ENSMUST00000186616 536 ntBASIC13.47□□□□□ -0.25
Col11a1Q61245 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Gm10263-201ENSMUST00000085163 300 ntBASIC13.47□□□□□ -0.25
Col11a1Q61245 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.47□□□□□ -0.25
Col11a1Q61245 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Col11a1Q61245 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col11a1Q61245 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col11a1Q61245 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms