Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
ClpbQ60649 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.51
ClpbQ60649 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.83□□□□□ -0.52
ClpbQ60649 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.83□□□□□ -0.52
ClpbQ60649 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ClpbQ60649 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
ClpbQ60649 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
ClpbQ60649 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.83□□□□□ -0.52
ClpbQ60649 Gm15703-201ENSMUST00000120250 880 ntBASIC11.83□□□□□ -0.52
ClpbQ60649 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ClpbQ60649 Gm7584-201ENSMUST00000175829 940 ntBASIC11.83□□□□□ -0.52
ClpbQ60649 Gm27320-201ENSMUST00000184892 109 ntBASIC11.83□□□□□ -0.52
ClpbQ60649 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.83□□□□□ -0.52
ClpbQ60649 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.83□□□□□ -0.52
ClpbQ60649 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.83□□□□□ -0.52
ClpbQ60649 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.83□□□□□ -0.52
ClpbQ60649 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
ClpbQ60649 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClpbQ60649 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ClpbQ60649 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.83□□□□□ -0.52
ClpbQ60649 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
ClpbQ60649 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
ClpbQ60649 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.82□□□□□ -0.52
ClpbQ60649 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
ClpbQ60649 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.82□□□□□ -0.52
ClpbQ60649 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.82□□□□□ -0.52
ClpbQ60649 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ClpbQ60649 Gm44405-201ENSMUST00000198952 126 ntBASIC11.82□□□□□ -0.52
ClpbQ60649 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.82□□□□□ -0.52
ClpbQ60649 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
ClpbQ60649 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
ClpbQ60649 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.82□□□□□ -0.52
ClpbQ60649 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ClpbQ60649 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
ClpbQ60649 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.82□□□□□ -0.52
ClpbQ60649 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.82□□□□□ -0.52
ClpbQ60649 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClpbQ60649 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.82□□□□□ -0.52
ClpbQ60649 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms