Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.74□□□□□ -0.53
Nr1h4Q60641 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.74□□□□□ -0.53
Nr1h4Q60641 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.74□□□□□ -0.53
Nr1h4Q60641 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nr1h4Q60641 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm12203-201ENSMUST00000118235 598 ntBASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm11803-201ENSMUST00000119966 444 ntBASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm12209-201ENSMUST00000120089 596 ntBASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm8810-201ENSMUST00000172895 754 ntBASIC11.73□□□□□ -0.53
Nr1h4Q60641 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.73□□□□□ -0.53
Nr1h4Q60641 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm44882-201ENSMUST00000205702 802 ntBASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.73□□□□□ -0.53
Nr1h4Q60641 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nr1h4Q60641 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.72□□□□□ -0.53
Nr1h4Q60641 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nr1h4Q60641 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nr1h4Q60641 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nr1h4Q60641 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nr1h4Q60641 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.72□□□□□ -0.53
Nr1h4Q60641 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nr1h4Q60641 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nr1h4Q60641 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nr1h4Q60641 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Nr1h4Q60641 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nr1h4Q60641 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms