Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.35□□□□□ -0.11
Prdm1Q60636 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Gm24830-201ENSMUST00000102024 166 ntBASIC14.35□□□□□ -0.11
Prdm1Q60636 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Prdm1Q60636 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.35□□□□□ -0.11
Prdm1Q60636 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.35□□□□□ -0.11
Prdm1Q60636 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.35□□□□□ -0.11
Prdm1Q60636 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.35□□□□□ -0.11
Prdm1Q60636 Gm38317-201ENSMUST00000195564 343 ntBASIC14.35□□□□□ -0.11
Prdm1Q60636 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Gm26232-201ENSMUST00000083360 166 ntBASIC14.35□□□□□ -0.11
Prdm1Q60636 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.35□□□□□ -0.11
Prdm1Q60636 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Prdm1Q60636 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Prdm1Q60636 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.35□□□□□ -0.11
Prdm1Q60636 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Prdm1Q60636 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.35□□□□□ -0.11
Prdm1Q60636 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Prdm1Q60636 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.34□□□□□ -0.11
Prdm1Q60636 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Prdm1Q60636 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Prdm1Q60636 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.34□□□□□ -0.11
Prdm1Q60636 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Prdm1Q60636 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Prdm1Q60636 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Prdm1Q60636 Gm6963-201ENSMUST00000147879 379 ntBASIC14.34□□□□□ -0.11
Prdm1Q60636 Gm25700-201ENSMUST00000177693 110 ntBASIC14.34□□□□□ -0.11
Prdm1Q60636 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.34□□□□□ -0.11
Prdm1Q60636 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.34□□□□□ -0.11
Prdm1Q60636 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.34□□□□□ -0.11
Prdm1Q60636 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.34□□□□□ -0.11
Prdm1Q60636 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prdm1Q60636 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.34□□□□□ -0.11
Prdm1Q60636 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prdm1Q60636 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prdm1Q60636 Cog3-203ENSMUST00000227473 4197 ntBASIC14.34□□□□□ -0.11
Prdm1Q60636 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prdm1Q60636 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Prdm1Q60636 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prdm1Q60636 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.33□□□□□ -0.11
Prdm1Q60636 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prdm1Q60636 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Prdm1Q60636 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.33□□□□□ -0.12
Prdm1Q60636 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.33□□□□□ -0.12
Prdm1Q60636 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.33□□□□□ -0.12
Prdm1Q60636 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.33□□□□□ -0.12
Prdm1Q60636 Gm12015-201ENSMUST00000117065 843 ntBASIC14.33□□□□□ -0.12
Prdm1Q60636 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.33□□□□□ -0.12
Prdm1Q60636 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.33□□□□□ -0.12
Prdm1Q60636 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.33□□□□□ -0.12
Prdm1Q60636 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.33□□□□□ -0.12
Prdm1Q60636 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Prdm1Q60636 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Prdm1Q60636 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.33□□□□□ -0.12
Prdm1Q60636 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.33□□□□□ -0.12
Prdm1Q60636 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms