Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.78□□□□□ -0.36
Trim38Q5SZ99 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Gm22018-201ENSMUST00000104357 131 ntBASIC12.78□□□□□ -0.36
Trim38Q5SZ99 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Gm13316-201ENSMUST00000140537 691 ntBASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Gm18062-201ENSMUST00000208020 547 ntBASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Gm18055-201ENSMUST00000208254 547 ntBASIC12.78□□□□□ -0.36
Trim38Q5SZ99 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.78□□□□□ -0.36
Trim38Q5SZ99 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.78□□□□□ -0.36
Trim38Q5SZ99 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim38Q5SZ99 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Gm23931-201ENSMUST00000103842 109 ntBASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Gm13570-201ENSMUST00000140763 309 ntBASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Matn2-203ENSMUST00000226766 3252 ntBASIC12.77□□□□□ -0.37
Trim38Q5SZ99 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim38Q5SZ99 Gm38002-201ENSMUST00000193255 180 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms