Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.1□□□□□ -0.31
Shroom1Q5SX79 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Gm9230-201ENSMUST00000188228 532 ntBASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Shroom1Q5SX79 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Gm7003-201ENSMUST00000195089 312 ntBASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Gm18730-201ENSMUST00000218038 343 ntBASIC13.09□□□□□ -0.31
Shroom1Q5SX79 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.09□□□□□ -0.31
Shroom1Q5SX79 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shroom1Q5SX79 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 243.7 ms