Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Gm27839-201ENSMUST00000184242 106 ntBASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Gm29649-201ENSMUST00000185649 419 ntBASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Gm6091-201ENSMUST00000098307 165 ntBASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc27Q3V036 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC15.71■□□□□ 0.1
Ccdc27Q3V036 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc27Q3V036 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc27Q3V036 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc27Q3V036 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Ccdc27Q3V036 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Ccdc27Q3V036 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.7■□□□□ 0.1
Ccdc27Q3V036 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Snord83b-201ENSMUST00000104546 94 ntBASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Gm19163-201ENSMUST00000223313 780 ntBASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc27Q3V036 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc27Q3V036 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc27Q3V036 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms