Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Gm8652-201ENSMUST00000181363 964 ntBASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Gm27486-201ENSMUST00000184923 80 ntBASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa3Q3UPR0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Gm16202-201ENSMUST00000117532 544 ntBASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Gm11814-201ENSMUST00000119515 929 ntBASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Gm17150-201ENSMUST00000165577 381 ntBASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Gm9520-201ENSMUST00000209460 1253 ntBASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 AC172027.1-201ENSMUST00000217659 337 ntBASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa3Q3UPR0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa3Q3UPR0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms