Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Gm6013-201ENSMUST00000212264 699 ntBASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Gm9996-201ENSMUST00000070359 913 ntBASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.17□□□□□ -0.14
Ctdnep1Q3TP92 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Gm30285-201ENSMUST00000214614 422 ntBASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Gm5186-201ENSMUST00000218781 920 ntBASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Gm7399-201ENSMUST00000032395 858 ntBASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdnep1Q3TP92 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdnep1Q3TP92 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ctdnep1Q3TP92 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctdnep1Q3TP92 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms