Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm18893-201ENSMUST00000198416 943 ntBASIC11.82□□□□□ -0.52
Hoxc4Q08624 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Gm807-202ENSMUST00000224929 408 ntBASIC11.82□□□□□ -0.52
Hoxc4Q08624 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.82□□□□□ -0.52
Hoxc4Q08624 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Gm5705-201ENSMUST00000066241 711 ntBASIC11.82□□□□□ -0.52
Hoxc4Q08624 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Hoxc4Q08624 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.82□□□□□ -0.52
Hoxc4Q08624 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm13035-201ENSMUST00000117496 342 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm12857-201ENSMUST00000117678 592 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm15610-201ENSMUST00000120584 195 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm11660-201ENSMUST00000120955 412 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm23085-201ENSMUST00000157849 293 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.81□□□□□ -0.52
Hoxc4Q08624 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc4Q08624 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm12501-201ENSMUST00000119163 529 ntBASIC11.8□□□□□ -0.52
Hoxc4Q08624 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm2965-201ENSMUST00000198365 343 ntBASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms