Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Gm5733-201ENSMUST00000190232 939 ntBASIC13.3□□□□□ -0.28
Col9a2Q07643 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.3□□□□□ -0.28
Col9a2Q07643 Gm44882-201ENSMUST00000205702 802 ntBASIC13.3□□□□□ -0.28
Col9a2Q07643 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col9a2Q07643 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.3□□□□□ -0.28
Col9a2Q07643 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.3□□□□□ -0.28
Col9a2Q07643 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.3□□□□□ -0.28
Col9a2Q07643 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.29□□□□□ -0.28
Col9a2Q07643 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.29□□□□□ -0.28
Col9a2Q07643 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col9a2Q07643 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col9a2Q07643 Gm23596-201ENSMUST00000104304 132 ntBASIC13.29□□□□□ -0.28
Col9a2Q07643 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.29□□□□□ -0.28
Col9a2Q07643 Gm13045-201ENSMUST00000119019 712 ntBASIC13.29□□□□□ -0.28
Col9a2Q07643 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.29□□□□□ -0.28
Col9a2Q07643 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.29□□□□□ -0.28
Col9a2Q07643 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Col9a2Q07643 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col9a2Q07643 Gm270-201ENSMUST00000223010 976 ntBASIC13.29□□□□□ -0.28
Col9a2Q07643 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.29□□□□□ -0.28
Col9a2Q07643 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.29□□□□□ -0.28
Col9a2Q07643 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.29□□□□□ -0.28
Col9a2Q07643 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col9a2Q07643 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col9a2Q07643 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col9a2Q07643 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Col9a2Q07643 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.29□□□□□ -0.28
Col9a2Q07643 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a2Q07643 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.29□□□□□ -0.28
Col9a2Q07643 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Map1b-203ENSMUST00000223725 2669 ntBASIC13.28□□□□□ -0.28
Col9a2Q07643 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.28□□□□□ -0.28
Col9a2Q07643 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.28□□□□□ -0.28
Col9a2Q07643 Gm23251-201ENSMUST00000103773 110 ntBASIC13.28□□□□□ -0.28
Col9a2Q07643 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Gm14058-201ENSMUST00000116082 735 ntBASIC13.28□□□□□ -0.28
Col9a2Q07643 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.28□□□□□ -0.28
Col9a2Q07643 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a2Q07643 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a2Q07643 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms