Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.39□□□□□ -0.43
Pfdn6Q03958 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.38□□□□□ -0.43
Pfdn6Q03958 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.38□□□□□ -0.43
Pfdn6Q03958 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.38□□□□□ -0.43
Pfdn6Q03958 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pfdn6Q03958 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.38□□□□□ -0.43
Pfdn6Q03958 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pfdn6Q03958 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Gm11425-201ENSMUST00000119608 498 ntBASIC12.37□□□□□ -0.43
Pfdn6Q03958 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Gm9022-201ENSMUST00000182482 992 ntBASIC12.37□□□□□ -0.43
Pfdn6Q03958 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Gm37008-201ENSMUST00000195712 319 ntBASIC12.37□□□□□ -0.43
Pfdn6Q03958 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.37□□□□□ -0.43
Pfdn6Q03958 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.37□□□□□ -0.43
Pfdn6Q03958 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Gm9396-201ENSMUST00000076703 567 ntBASIC12.37□□□□□ -0.43
Pfdn6Q03958 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Matn2-203ENSMUST00000226766 3252 ntBASIC12.37□□□□□ -0.43
Pfdn6Q03958 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.37□□□□□ -0.43
Pfdn6Q03958 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn6Q03958 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms