Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.17□□□□□ -0.3
VcpQ01853 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
VcpQ01853 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.17□□□□□ -0.3
VcpQ01853 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
VcpQ01853 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
VcpQ01853 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.16□□□□□ -0.3
VcpQ01853 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
VcpQ01853 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.16□□□□□ -0.3
VcpQ01853 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.16□□□□□ -0.3
VcpQ01853 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.16□□□□□ -0.3
VcpQ01853 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Gm44124-201ENSMUST00000204159 472 ntBASIC13.16□□□□□ -0.3
VcpQ01853 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.16□□□□□ -0.3
VcpQ01853 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.16□□□□□ -0.3
VcpQ01853 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.16□□□□□ -0.3
VcpQ01853 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
VcpQ01853 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
VcpQ01853 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.16□□□□□ -0.3
VcpQ01853 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.16□□□□□ -0.3
VcpQ01853 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.16□□□□□ -0.3
VcpQ01853 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcpQ01853 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Pck2-205ENSMUST00000226352 2784 ntBASIC13.15□□□□□ -0.3
VcpQ01853 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.15□□□□□ -0.3
VcpQ01853 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VcpQ01853 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.15□□□□□ -0.3
VcpQ01853 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VcpQ01853 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VcpQ01853 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.15□□□□□ -0.3
VcpQ01853 Gm11930-201ENSMUST00000117788 190 ntBASIC13.15□□□□□ -0.3
VcpQ01853 Gm14921-201ENSMUST00000118643 908 ntBASIC13.15□□□□□ -0.3
VcpQ01853 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.15□□□□□ -0.3
VcpQ01853 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VcpQ01853 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VcpQ01853 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
VcpQ01853 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.15□□□□□ -0.3
VcpQ01853 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.15□□□□□ -0.3
VcpQ01853 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Gm26035-201ENSMUST00000083065 308 ntBASIC13.15□□□□□ -0.3
VcpQ01853 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.15□□□□□ -0.3
VcpQ01853 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.15□□□□□ -0.3
VcpQ01853 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcpQ01853 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.15□□□□□ -0.3
VcpQ01853 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms