Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.54□□□□□ -0.4
Thumpd3P97770 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.54□□□□□ -0.4
Thumpd3P97770 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Thumpd3P97770 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Thumpd3P97770 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Thumpd3P97770 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Thumpd3P97770 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.54□□□□□ -0.4
Thumpd3P97770 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Thumpd3P97770 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Thumpd3P97770 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.53□□□□□ -0.4
Thumpd3P97770 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Thumpd3P97770 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Thumpd3P97770 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.53□□□□□ -0.4
Thumpd3P97770 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.53□□□□□ -0.4
Thumpd3P97770 Gm38002-201ENSMUST00000193255 180 ntBASIC12.53□□□□□ -0.4
Thumpd3P97770 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.53□□□□□ -0.4
Thumpd3P97770 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Thumpd3P97770 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Thumpd3P97770 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Thumpd3P97770 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Thumpd3P97770 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thumpd3P97770 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Thumpd3P97770 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thumpd3P97770 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thumpd3P97770 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thumpd3P97770 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thumpd3P97770 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.52□□□□□ -0.4
Thumpd3P97770 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thumpd3P97770 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Thumpd3P97770 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.52□□□□□ -0.41
Thumpd3P97770 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Thumpd3P97770 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.52□□□□□ -0.41
Thumpd3P97770 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.52□□□□□ -0.41
Thumpd3P97770 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.52□□□□□ -0.41
Thumpd3P97770 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.52□□□□□ -0.41
Thumpd3P97770 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Thumpd3P97770 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.52□□□□□ -0.41
Thumpd3P97770 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.52□□□□□ -0.41
Thumpd3P97770 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Thumpd3P97770 Rubie-203ENSMUST00000227803 2430 ntBASIC12.52□□□□□ -0.41
Thumpd3P97770 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Thumpd3P97770 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thumpd3P97770 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thumpd3P97770 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thumpd3P97770 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.51□□□□□ -0.41
Thumpd3P97770 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Thumpd3P97770 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thumpd3P97770 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thumpd3P97770 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms