Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.28□□□□□ -0.76
Pdlim4P70271 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Gm15370-201ENSMUST00000117158 253 ntBASIC10.28□□□□□ -0.76
Pdlim4P70271 Gm12241-201ENSMUST00000118330 726 ntBASIC10.28□□□□□ -0.76
Pdlim4P70271 Gm4986-201ENSMUST00000119731 549 ntBASIC10.28□□□□□ -0.76
Pdlim4P70271 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pdlim4P70271 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Gm13316-201ENSMUST00000140537 691 ntBASIC10.28□□□□□ -0.76
Pdlim4P70271 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Gm27023-201ENSMUST00000182372 285 ntBASIC10.28□□□□□ -0.76
Pdlim4P70271 Gm27501-201ENSMUST00000183599 107 ntBASIC10.28□□□□□ -0.76
Pdlim4P70271 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.28□□□□□ -0.76
Pdlim4P70271 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pdlim4P70271 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.27□□□□□ -0.76
Pdlim4P70271 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Pdlim4P70271 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Pdlim4P70271 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Pdlim4P70271 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pdlim4P70271 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Pdlim4P70271 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pdlim4P70271 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pdlim4P70271 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm15703-201ENSMUST00000120250 880 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm11964-201ENSMUST00000120982 444 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm13786-201ENSMUST00000122371 333 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
Pdlim4P70271 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
Pdlim4P70271 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm38158-201ENSMUST00000194617 339 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm38266-201ENSMUST00000194931 421 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.27□□□□□ -0.77
Pdlim4P70271 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm9368-201ENSMUST00000219348 831 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm7046-201ENSMUST00000221351 977 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.27□□□□□ -0.77
Pdlim4P70271 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.27□□□□□ -0.77
Pdlim4P70271 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.27□□□□□ -0.77
Pdlim4P70271 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Pdlim4P70271 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.27□□□□□ -0.77
Pdlim4P70271 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.27□□□□□ -0.77
Pdlim4P70271 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Pdlim4P70271 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Pdlim4P70271 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms