Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Gm8738-201ENSMUST00000172606 329 ntBASIC13.58□□□□□ -0.24
Hmgb1P63158 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Gm8762-201ENSMUST00000193486 339 ntBASIC13.58□□□□□ -0.24
Hmgb1P63158 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.58□□□□□ -0.24
Hmgb1P63158 Gm5781-201ENSMUST00000219792 443 ntBASIC13.58□□□□□ -0.24
Hmgb1P63158 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.58□□□□□ -0.24
Hmgb1P63158 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hmgb1P63158 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Hmgb1P63158 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.58□□□□□ -0.24
Hmgb1P63158 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Hmgb1P63158 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
Hmgb1P63158 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.58□□□□□ -0.24
Hmgb1P63158 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hmgb1P63158 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.57□□□□□ -0.24
Hmgb1P63158 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Hmgb1P63158 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Hmgb1P63158 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.57□□□□□ -0.24
Hmgb1P63158 Gm44958-201ENSMUST00000203734 736 ntBASIC13.57□□□□□ -0.24
Hmgb1P63158 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.57□□□□□ -0.24
Hmgb1P63158 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.57□□□□□ -0.24
Hmgb1P63158 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Snora73a-201ENSMUST00000082453 205 ntBASIC13.57□□□□□ -0.24
Hmgb1P63158 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Hmgb1P63158 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.57□□□□□ -0.24
Hmgb1P63158 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Hmgb1P63158 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgb1P63158 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Hmgb1P63158 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hmgb1P63158 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.56□□□□□ -0.24
Hmgb1P63158 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Gm9083-201ENSMUST00000120423 819 ntBASIC13.56□□□□□ -0.24
Hmgb1P63158 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.56□□□□□ -0.24
Hmgb1P63158 Gm4034-201ENSMUST00000187674 480 ntBASIC13.56□□□□□ -0.24
Hmgb1P63158 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hmgb1P63158 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.56□□□□□ -0.24
Hmgb1P63158 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.56□□□□□ -0.24
Hmgb1P63158 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.56□□□□□ -0.24
Hmgb1P63158 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.56□□□□□ -0.24
Hmgb1P63158 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hmgb1P63158 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Hmgb1P63158 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb1P63158 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms