Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.61□□□□□ -0.39
Ybx1P62960 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ybx1P62960 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ybx1P62960 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ybx1P62960 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Ybx1P62960 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ybx1P62960 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ybx1P62960 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Ybx1P62960 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.6□□□□□ -0.39
Ybx1P62960 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ybx1P62960 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ybx1P62960 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Ybx1P62960 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Gm7851-201ENSMUST00000117574 323 ntBASIC12.6□□□□□ -0.39
Ybx1P62960 Gm12501-201ENSMUST00000119163 529 ntBASIC12.6□□□□□ -0.39
Ybx1P62960 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ybx1P62960 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.6□□□□□ -0.39
Ybx1P62960 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.6□□□□□ -0.39
Ybx1P62960 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ybx1P62960 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.6□□□□□ -0.39
Ybx1P62960 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.6□□□□□ -0.39
Ybx1P62960 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.6□□□□□ -0.39
Ybx1P62960 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.6□□□□□ -0.39
Ybx1P62960 Gm1821-202ENSMUST00000227415 750 ntBASIC12.6□□□□□ -0.39
Ybx1P62960 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.6□□□□□ -0.39
Ybx1P62960 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ybx1P62960 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Ybx1P62960 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ybx1P62960 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ybx1P62960 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.59□□□□□ -0.39
Ybx1P62960 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ybx1P62960 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.59□□□□□ -0.39
Ybx1P62960 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Ybx1P62960 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.59□□□□□ -0.39
Ybx1P62960 Gm23596-201ENSMUST00000104304 132 ntBASIC12.59□□□□□ -0.39
Ybx1P62960 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.59□□□□□ -0.39
Ybx1P62960 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Gm12208-201ENSMUST00000122004 163 ntBASIC12.59□□□□□ -0.39
Ybx1P62960 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.59□□□□□ -0.39
Ybx1P62960 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.59□□□□□ -0.39
Ybx1P62960 Mir6546-201ENSMUST00000184460 62 ntBASIC12.59□□□□□ -0.39
Ybx1P62960 Gm5733-201ENSMUST00000190232 939 ntBASIC12.59□□□□□ -0.39
Ybx1P62960 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.59□□□□□ -0.39
Ybx1P62960 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.59□□□□□ -0.39
Ybx1P62960 Gm44551-201ENSMUST00000208804 171 ntBASIC12.59□□□□□ -0.39
Ybx1P62960 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.59□□□□□ -0.39
Ybx1P62960 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.59□□□□□ -0.39
Ybx1P62960 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.59□□□□□ -0.39
Ybx1P62960 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ybx1P62960 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.59□□□□□ -0.39
Ybx1P62960 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.59□□□□□ -0.39
Ybx1P62960 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.59□□□□□ -0.39
Ybx1P62960 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Ybx1P62960 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ybx1P62960 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms