Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Sec61a1P61620 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.87□□□□□ -0.67
Sec61a1P61620 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.87□□□□□ -0.67
Sec61a1P61620 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.87□□□□□ -0.67
Sec61a1P61620 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.87□□□□□ -0.67
Sec61a1P61620 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.87□□□□□ -0.67
Sec61a1P61620 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sec61a1P61620 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Gm8805-201ENSMUST00000117848 313 ntBASIC10.87□□□□□ -0.67
Sec61a1P61620 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.87□□□□□ -0.67
Sec61a1P61620 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sec61a1P61620 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Gm17420-201ENSMUST00000164753 153 ntBASIC10.87□□□□□ -0.67
Sec61a1P61620 Gm27572-201ENSMUST00000183702 255 ntBASIC10.87□□□□□ -0.67
Sec61a1P61620 Gm5370-201ENSMUST00000187187 574 ntBASIC10.87□□□□□ -0.67
Sec61a1P61620 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Sec61a1P61620 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.87□□□□□ -0.67
Sec61a1P61620 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sec61a1P61620 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.87□□□□□ -0.67
Sec61a1P61620 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sec61a1P61620 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Sec61a1P61620 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sec61a1P61620 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Sec61a1P61620 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sec61a1P61620 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a1P61620 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sec61a1P61620 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.86□□□□□ -0.67
Sec61a1P61620 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Mir1938-201ENSMUST00000158746 100 ntBASIC10.86□□□□□ -0.67
Sec61a1P61620 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
Sec61a1P61620 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Gm7029-201ENSMUST00000173226 450 ntBASIC10.86□□□□□ -0.67
Sec61a1P61620 Gm27390-201ENSMUST00000184516 176 ntBASIC10.86□□□□□ -0.67
Sec61a1P61620 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.86□□□□□ -0.67
Sec61a1P61620 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.86□□□□□ -0.67
Sec61a1P61620 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.86□□□□□ -0.67
Sec61a1P61620 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.86□□□□□ -0.67
Sec61a1P61620 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.86□□□□□ -0.67
Sec61a1P61620 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.86□□□□□ -0.67
Sec61a1P61620 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sec61a1P61620 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sec61a1P61620 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a1P61620 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms