Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Tpm1P58771 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 Gm8805-201ENSMUST00000117848 313 ntBASIC13.71□□□□□ -0.21
Tpm1P58771 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.71□□□□□ -0.21
Tpm1P58771 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.71□□□□□ -0.21
Tpm1P58771 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Tpm1P58771 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.71□□□□□ -0.21
Tpm1P58771 Gm17208-201ENSMUST00000168388 535 ntBASIC13.71□□□□□ -0.21
Tpm1P58771 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tpm1P58771 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.71□□□□□ -0.21
Tpm1P58771 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.71□□□□□ -0.21
Tpm1P58771 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.71□□□□□ -0.21
Tpm1P58771 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.71□□□□□ -0.21
Tpm1P58771 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.71□□□□□ -0.21
Tpm1P58771 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.71□□□□□ -0.21
Tpm1P58771 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.71□□□□□ -0.21
Tpm1P58771 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.71□□□□□ -0.21
Tpm1P58771 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.71□□□□□ -0.21
Tpm1P58771 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.71□□□□□ -0.21
Tpm1P58771 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Tpm1P58771 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tpm1P58771 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tpm1P58771 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tpm1P58771 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Tpm1P58771 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tpm1P58771 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.71□□□□□ -0.22
Tpm1P58771 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Tpm1P58771 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tpm1P58771 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tpm1P58771 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Tpm1P58771 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tpm1P58771 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.71□□□□□ -0.22
Tpm1P58771 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Tpm1P58771 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.7□□□□□ -0.22
Tpm1P58771 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.7□□□□□ -0.22
Tpm1P58771 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.7□□□□□ -0.22
Tpm1P58771 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.7□□□□□ -0.22
Tpm1P58771 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.7□□□□□ -0.22
Tpm1P58771 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.7□□□□□ -0.22
Tpm1P58771 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.7□□□□□ -0.22
Tpm1P58771 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm1P58771 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Tpm1P58771 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Tpm1P58771 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Tpm1P58771 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.69□□□□□ -0.22
Tpm1P58771 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Tpm1P58771 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.69□□□□□ -0.22
Tpm1P58771 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.69□□□□□ -0.22
Tpm1P58771 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.69□□□□□ -0.22
Tpm1P58771 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Gm12384-201ENSMUST00000119228 919 ntBASIC13.69□□□□□ -0.22
Tpm1P58771 Gm15703-201ENSMUST00000120250 880 ntBASIC13.69□□□□□ -0.22
Tpm1P58771 Gm13123-201ENSMUST00000122173 492 ntBASIC13.69□□□□□ -0.22
Tpm1P58771 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Gm22121-201ENSMUST00000175148 54 ntBASIC13.69□□□□□ -0.22
Tpm1P58771 Gm37922-201ENSMUST00000195596 455 ntBASIC13.69□□□□□ -0.22
Tpm1P58771 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.69□□□□□ -0.22
Tpm1P58771 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.69□□□□□ -0.22
Tpm1P58771 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Tpm1P58771 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms