Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Gm24526-201ENSMUST00000082921 158 ntBASIC9.94□□□□□ -0.82
Sssca1P56873 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Sssca1P56873 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Sssca1P56873 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Sssca1P56873 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Sssca1P56873 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Sssca1P56873 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Sssca1P56873 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.93□□□□□ -0.82
Sssca1P56873 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.93□□□□□ -0.82
Sssca1P56873 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Sssca1P56873 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.93□□□□□ -0.82
Sssca1P56873 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Snord83b-201ENSMUST00000104546 94 ntBASIC9.93□□□□□ -0.82
Sssca1P56873 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.93□□□□□ -0.82
Sssca1P56873 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Gm8810-201ENSMUST00000172895 754 ntBASIC9.93□□□□□ -0.82
Sssca1P56873 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.93□□□□□ -0.82
Sssca1P56873 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Sssca1P56873 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Sssca1P56873 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Gm6473-201ENSMUST00000188572 1210 ntBASIC9.93□□□□□ -0.82
Sssca1P56873 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.93□□□□□ -0.82
Sssca1P56873 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Sssca1P56873 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.93□□□□□ -0.82
Sssca1P56873 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.93□□□□□ -0.82
Sssca1P56873 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Sssca1P56873 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Sssca1P56873 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.93□□□□□ -0.82
Sssca1P56873 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.93□□□□□ -0.82
Sssca1P56873 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Sssca1P56873 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.93□□□□□ -0.82
Sssca1P56873 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Sssca1P56873 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.93□□□□□ -0.82
Sssca1P56873 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Sssca1P56873 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sssca1P56873 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.93□□□□□ -0.82
Sssca1P56873 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.92□□□□□ -0.82
Sssca1P56873 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Sssca1P56873 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Sssca1P56873 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Gm12203-201ENSMUST00000118235 598 ntBASIC9.92□□□□□ -0.82
Sssca1P56873 Gm12209-201ENSMUST00000120089 596 ntBASIC9.92□□□□□ -0.82
Sssca1P56873 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.92□□□□□ -0.82
Sssca1P56873 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Gm27437-201ENSMUST00000183429 107 ntBASIC9.92□□□□□ -0.82
Sssca1P56873 Gm18018-201ENSMUST00000198273 408 ntBASIC9.92□□□□□ -0.82
Sssca1P56873 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC9.92□□□□□ -0.82
Sssca1P56873 Gm44882-201ENSMUST00000205702 802 ntBASIC9.92□□□□□ -0.82
Sssca1P56873 Gm4768-201ENSMUST00000206199 686 ntBASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms