Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.3□□□□□ -0.44
Lim2P56563 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.3□□□□□ -0.44
Lim2P56563 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Lim2P56563 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lim2P56563 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lim2P56563 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lim2P56563 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lim2P56563 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.3□□□□□ -0.44
Lim2P56563 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lim2P56563 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.29□□□□□ -0.44
Lim2P56563 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Lim2P56563 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lim2P56563 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.29□□□□□ -0.44
Lim2P56563 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lim2P56563 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lim2P56563 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lim2P56563 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Gm9083-201ENSMUST00000120423 819 ntBASIC12.29□□□□□ -0.44
Lim2P56563 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Lim2P56563 Gm25668-201ENSMUST00000157700 129 ntBASIC12.29□□□□□ -0.44
Lim2P56563 Gm26083-201ENSMUST00000157904 193 ntBASIC12.29□□□□□ -0.44
Lim2P56563 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.29□□□□□ -0.44
Lim2P56563 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.29□□□□□ -0.44
Lim2P56563 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Gm27046-201ENSMUST00000182160 463 ntBASIC12.29□□□□□ -0.44
Lim2P56563 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.29□□□□□ -0.44
Lim2P56563 Gm6082-201ENSMUST00000215204 454 ntBASIC12.29□□□□□ -0.44
Lim2P56563 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.29□□□□□ -0.44
Lim2P56563 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.29□□□□□ -0.44
Lim2P56563 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.29□□□□□ -0.44
Lim2P56563 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lim2P56563 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.29□□□□□ -0.44
Lim2P56563 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lim2P56563 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Lim2P56563 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.28□□□□□ -0.44
Lim2P56563 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Lim2P56563 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Lim2P56563 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Lim2P56563 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Gm23119-201ENSMUST00000158610 140 ntBASIC12.28□□□□□ -0.44
Lim2P56563 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.28□□□□□ -0.44
Lim2P56563 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lim2P56563 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lim2P56563 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.28□□□□□ -0.44
Lim2P56563 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms