Protein–RNA interactions for Protein: P56389

Cda, Cytidine deaminase, mousemouse

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CdaP56389 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.02□□□□□ -0.65
CdaP56389 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.02□□□□□ -0.65
CdaP56389 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.02□□□□□ -0.65
CdaP56389 Gm3890-201ENSMUST00000182416 207 ntBASIC11.02□□□□□ -0.65
CdaP56389 Gm18304-201ENSMUST00000189162 546 ntBASIC11.02□□□□□ -0.65
CdaP56389 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.02□□□□□ -0.65
CdaP56389 Gm6266-201ENSMUST00000203844 806 ntBASIC11.02□□□□□ -0.65
CdaP56389 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.02□□□□□ -0.65
CdaP56389 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.02□□□□□ -0.65
CdaP56389 Gm45930-201ENSMUST00000221330 292 ntBASIC11.02□□□□□ -0.65
CdaP56389 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.02□□□□□ -0.65
CdaP56389 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.02□□□□□ -0.65
CdaP56389 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.02□□□□□ -0.65
CdaP56389 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
CdaP56389 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.02□□□□□ -0.65
CdaP56389 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.02□□□□□ -0.65
CdaP56389 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
CdaP56389 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CdaP56389 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CdaP56389 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.02□□□□□ -0.65
CdaP56389 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
CdaP56389 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CdaP56389 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.01□□□□□ -0.65
CdaP56389 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.01□□□□□ -0.65
CdaP56389 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.01□□□□□ -0.65
CdaP56389 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CdaP56389 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Gm9083-201ENSMUST00000120423 819 ntBASIC11.01□□□□□ -0.65
CdaP56389 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.01□□□□□ -0.65
CdaP56389 Gm42599-201ENSMUST00000201308 469 ntBASIC11.01□□□□□ -0.65
CdaP56389 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.01□□□□□ -0.65
CdaP56389 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
CdaP56389 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CdaP56389 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CdaP56389 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CdaP56389 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.01□□□□□ -0.65
CdaP56389 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CdaP56389 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CdaP56389 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CdaP56389 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CdaP56389 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CdaP56389 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CdaP56389 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CdaP56389 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CdaP56389 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
CdaP56389 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CdaP56389 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CdaP56389 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CdaP56389 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11□□□□□ -0.65
CdaP56389 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11□□□□□ -0.65
CdaP56389 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11□□□□□ -0.65
CdaP56389 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11□□□□□ -0.65
CdaP56389 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11□□□□□ -0.65
CdaP56389 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11□□□□□ -0.65
CdaP56389 Gm25261-201ENSMUST00000157416 134 ntBASIC11□□□□□ -0.65
CdaP56389 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
CdaP56389 Gm27731-201ENSMUST00000185192 107 ntBASIC11□□□□□ -0.65
CdaP56389 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms