Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Gm7857-201ENSMUST00000117957 358 ntBASIC12.16□□□□□ -0.46
CtskP55097 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.16□□□□□ -0.46
CtskP55097 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.16□□□□□ -0.46
CtskP55097 Gm16296-201ENSMUST00000159905 325 ntBASIC12.16□□□□□ -0.46
CtskP55097 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC12.16□□□□□ -0.46
CtskP55097 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtskP55097 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CtskP55097 Gm19208-201ENSMUST00000213861 912 ntBASIC12.16□□□□□ -0.46
CtskP55097 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.16□□□□□ -0.46
CtskP55097 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtskP55097 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtskP55097 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtskP55097 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtskP55097 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CtskP55097 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CtskP55097 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.16□□□□□ -0.46
CtskP55097 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CtskP55097 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtskP55097 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CtskP55097 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtskP55097 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CtskP55097 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.15□□□□□ -0.46
CtskP55097 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.15□□□□□ -0.46
CtskP55097 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.15□□□□□ -0.46
CtskP55097 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
CtskP55097 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CtskP55097 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CtskP55097 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.15□□□□□ -0.46
CtskP55097 Gm12217-201ENSMUST00000118858 696 ntBASIC12.15□□□□□ -0.46
CtskP55097 Gm14208-201ENSMUST00000119645 678 ntBASIC12.15□□□□□ -0.46
CtskP55097 Gm14363-201ENSMUST00000122304 409 ntBASIC12.15□□□□□ -0.46
CtskP55097 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CtskP55097 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CtskP55097 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.15□□□□□ -0.46
CtskP55097 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
CtskP55097 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.15□□□□□ -0.46
CtskP55097 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.15□□□□□ -0.46
CtskP55097 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.15□□□□□ -0.46
CtskP55097 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.15□□□□□ -0.46
CtskP55097 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
CtskP55097 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
CtskP55097 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CtskP55097 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.15□□□□□ -0.46
CtskP55097 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CtskP55097 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
CtskP55097 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CtskP55097 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CtskP55097 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CtskP55097 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CtskP55097 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
CtskP55097 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
CtskP55097 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CtskP55097 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CtskP55097 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CtskP55097 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CtskP55097 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CtskP55097 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CtskP55097 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CtskP55097 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CtskP55097 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CtskP55097 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CtskP55097 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CtskP55097 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CtskP55097 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.14□□□□□ -0.47
CtskP55097 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.14□□□□□ -0.47
CtskP55097 B9d1os-201ENSMUST00000137010 674 ntBASIC12.14□□□□□ -0.47
CtskP55097 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.14□□□□□ -0.47
CtskP55097 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
CtskP55097 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.14□□□□□ -0.47
CtskP55097 Gm25700-201ENSMUST00000177693 110 ntBASIC12.14□□□□□ -0.47
CtskP55097 Mir6979-201ENSMUST00000183927 56 ntBASIC12.14□□□□□ -0.47
CtskP55097 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.14□□□□□ -0.47
CtskP55097 Gm44262-201ENSMUST00000204969 372 ntBASIC12.14□□□□□ -0.47
CtskP55097 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.14□□□□□ -0.47
CtskP55097 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.14□□□□□ -0.47
CtskP55097 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CtskP55097 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CtskP55097 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms