Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox1P53783 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox1P53783 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sox1P53783 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Sox1P53783 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Sox1P53783 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.56□□□□□ -0.4
Sox1P53783 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Gm14942-201ENSMUST00000119642 336 ntBASIC12.56□□□□□ -0.4
Sox1P53783 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.56□□□□□ -0.4
Sox1P53783 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.56□□□□□ -0.4
Sox1P53783 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Gm19587-201ENSMUST00000191395 545 ntBASIC12.56□□□□□ -0.4
Sox1P53783 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.56□□□□□ -0.4
Sox1P53783 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.56□□□□□ -0.4
Sox1P53783 Gm43969-201ENSMUST00000204833 535 ntBASIC12.56□□□□□ -0.4
Sox1P53783 Gm45310-201ENSMUST00000210436 275 ntBASIC12.56□□□□□ -0.4
Sox1P53783 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.56□□□□□ -0.4
Sox1P53783 Thoc7-209ENSMUST00000225325 765 ntBASIC12.56□□□□□ -0.4
Sox1P53783 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sox1P53783 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Gm38116-201ENSMUST00000193873 1533 ntBASIC12.56□□□□□ -0.4
Sox1P53783 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sox1P53783 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox1P53783 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.56□□□□□ -0.4
Sox1P53783 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox1P53783 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Sox1P53783 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sox1P53783 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.55□□□□□ -0.4
Sox1P53783 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.55□□□□□ -0.4
Sox1P53783 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Gm17214-201ENSMUST00000164501 541 ntBASIC12.55□□□□□ -0.4
Sox1P53783 Gm17070-201ENSMUST00000170463 784 ntBASIC12.55□□□□□ -0.4
Sox1P53783 Gm3726-201ENSMUST00000203110 785 ntBASIC12.55□□□□□ -0.4
Sox1P53783 Gm43912-201ENSMUST00000204352 538 ntBASIC12.55□□□□□ -0.4
Sox1P53783 Gm9797-202ENSMUST00000218003 294 ntBASIC12.55□□□□□ -0.4
Sox1P53783 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.55□□□□□ -0.4
Sox1P53783 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Sox1P53783 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Sox1P53783 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Sox1P53783 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox1P53783 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Sox1P53783 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox1P53783 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox1P53783 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox1P53783 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms