Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pdx1P52946 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pdx1P52946 Gm15547-201ENSMUST00000122152 333 ntBASIC12.16□□□□□ -0.46
Pdx1P52946 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.16□□□□□ -0.46
Pdx1P52946 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pdx1P52946 Gm7584-201ENSMUST00000175829 940 ntBASIC12.16□□□□□ -0.46
Pdx1P52946 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdx1P52946 Gm44364-201ENSMUST00000198368 141 ntBASIC12.16□□□□□ -0.46
Pdx1P52946 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.16□□□□□ -0.46
Pdx1P52946 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdx1P52946 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Gm3961-201ENSMUST00000204425 994 ntBASIC12.16□□□□□ -0.46
Pdx1P52946 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.16□□□□□ -0.46
Pdx1P52946 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Pdx1P52946 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pdx1P52946 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdx1P52946 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdx1P52946 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pdx1P52946 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Pdx1P52946 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.15□□□□□ -0.46
Pdx1P52946 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.15□□□□□ -0.46
Pdx1P52946 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 Gm24830-201ENSMUST00000102024 166 ntBASIC12.15□□□□□ -0.46
Pdx1P52946 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pdx1P52946 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.15□□□□□ -0.46
Pdx1P52946 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Gm7783-201ENSMUST00000204795 781 ntBASIC12.15□□□□□ -0.46
Pdx1P52946 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.15□□□□□ -0.46
Pdx1P52946 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pdx1P52946 Gm26232-201ENSMUST00000083360 166 ntBASIC12.15□□□□□ -0.46
Pdx1P52946 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.15□□□□□ -0.46
Pdx1P52946 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pdx1P52946 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Pdx1P52946 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Pdx1P52946 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pdx1P52946 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdx1P52946 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pdx1P52946 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pdx1P52946 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pdx1P52946 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pdx1P52946 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Pdx1P52946 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pdx1P52946 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.14□□□□□ -0.47
Pdx1P52946 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pdx1P52946 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pdx1P52946 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pdx1P52946 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.14□□□□□ -0.47
Pdx1P52946 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms