Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Atp6v1aP50516 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atp6v1aP50516 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 AC154849.3-201ENSMUST00000223733 1660 ntBASIC14.84□□□□□ -0.03
Atp6v1aP50516 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.84□□□□□ -0.03
Atp6v1aP50516 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Gm12857-201ENSMUST00000117678 592 ntBASIC14.84□□□□□ -0.03
Atp6v1aP50516 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.84□□□□□ -0.03
Atp6v1aP50516 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.84□□□□□ -0.03
Atp6v1aP50516 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Gm45550-201ENSMUST00000209380 946 ntBASIC14.84□□□□□ -0.03
Atp6v1aP50516 Gm9132-201ENSMUST00000210182 832 ntBASIC14.84□□□□□ -0.03
Atp6v1aP50516 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Gm10288-201ENSMUST00000084614 537 ntBASIC14.84□□□□□ -0.03
Atp6v1aP50516 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Atp6v1aP50516 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.84□□□□□ -0.03
Atp6v1aP50516 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atp6v1aP50516 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Atp6v1aP50516 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.83□□□□□ -0.03
Atp6v1aP50516 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Atp6v1aP50516 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Atp6v1aP50516 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Atp6v1aP50516 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Atp6v1aP50516 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Atp6v1aP50516 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Gm11509-201ENSMUST00000117358 325 ntBASIC14.83□□□□□ -0.04
Atp6v1aP50516 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.83□□□□□ -0.04
Atp6v1aP50516 Gm7722-201ENSMUST00000120646 741 ntBASIC14.83□□□□□ -0.04
Atp6v1aP50516 Gm8199-201ENSMUST00000121323 823 ntBASIC14.83□□□□□ -0.04
Atp6v1aP50516 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.83□□□□□ -0.04
Atp6v1aP50516 Gm16397-201ENSMUST00000122201 494 ntBASIC14.83□□□□□ -0.04
Atp6v1aP50516 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.83□□□□□ -0.04
Atp6v1aP50516 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Gm4157-201ENSMUST00000211647 679 ntBASIC14.83□□□□□ -0.04
Atp6v1aP50516 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atp6v1aP50516 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atp6v1aP50516 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Atp6v1aP50516 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Atp6v1aP50516 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms