Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.83□□□□□ -0.68
GdnfP48540 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.83□□□□□ -0.68
GdnfP48540 Gm8805-201ENSMUST00000117848 313 ntBASIC10.83□□□□□ -0.68
GdnfP48540 Gm8213-201ENSMUST00000118191 441 ntBASIC10.83□□□□□ -0.68
GdnfP48540 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.83□□□□□ -0.68
GdnfP48540 Gm13369-201ENSMUST00000119442 987 ntBASIC10.83□□□□□ -0.68
GdnfP48540 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.83□□□□□ -0.68
GdnfP48540 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.83□□□□□ -0.68
GdnfP48540 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
GdnfP48540 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Gm8602-201ENSMUST00000184045 607 ntBASIC10.83□□□□□ -0.68
GdnfP48540 Gm27486-201ENSMUST00000184923 80 ntBASIC10.83□□□□□ -0.68
GdnfP48540 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC10.83□□□□□ -0.68
GdnfP48540 Gm5244-202ENSMUST00000189517 743 ntBASIC10.83□□□□□ -0.68
GdnfP48540 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC10.83□□□□□ -0.68
GdnfP48540 Gm6458-201ENSMUST00000211573 635 ntBASIC10.83□□□□□ -0.68
GdnfP48540 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC10.83□□□□□ -0.68
GdnfP48540 Gm8227-201ENSMUST00000223306 571 ntBASIC10.83□□□□□ -0.68
GdnfP48540 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Gm6091-201ENSMUST00000098307 165 ntBASIC10.83□□□□□ -0.68
GdnfP48540 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.83□□□□□ -0.68
GdnfP48540 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.83□□□□□ -0.68
GdnfP48540 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.82□□□□□ -0.68
GdnfP48540 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
GdnfP48540 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.82□□□□□ -0.68
GdnfP48540 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.82□□□□□ -0.68
GdnfP48540 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
GdnfP48540 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.82□□□□□ -0.68
GdnfP48540 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.82□□□□□ -0.68
GdnfP48540 Gm22885-201ENSMUST00000157410 107 ntBASIC10.82□□□□□ -0.68
GdnfP48540 Gm22331-201ENSMUST00000158066 136 ntBASIC10.82□□□□□ -0.68
GdnfP48540 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
GdnfP48540 Gm28745-201ENSMUST00000190069 305 ntBASIC10.82□□□□□ -0.68
GdnfP48540 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
GdnfP48540 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.82□□□□□ -0.68
GdnfP48540 Gm7561-201ENSMUST00000211203 886 ntBASIC10.82□□□□□ -0.68
GdnfP48540 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
GdnfP48540 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
GdnfP48540 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.82□□□□□ -0.68
GdnfP48540 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.82□□□□□ -0.68
GdnfP48540 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
GdnfP48540 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
GdnfP48540 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.82□□□□□ -0.68
GdnfP48540 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
GdnfP48540 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
GdnfP48540 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms