Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Rfx2P48379 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.93□□□□□ -0.34
Rfx2P48379 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.93□□□□□ -0.34
Rfx2P48379 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.93□□□□□ -0.34
Rfx2P48379 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.93□□□□□ -0.34
Rfx2P48379 Gm44651-201ENSMUST00000207343 372 ntBASIC12.93□□□□□ -0.34
Rfx2P48379 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Gm8712-201ENSMUST00000221090 701 ntBASIC12.93□□□□□ -0.34
Rfx2P48379 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.93□□□□□ -0.34
Rfx2P48379 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.93□□□□□ -0.34
Rfx2P48379 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.93□□□□□ -0.34
Rfx2P48379 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.93□□□□□ -0.34
Rfx2P48379 Gm10312-201ENSMUST00000078515 489 ntBASIC12.93□□□□□ -0.34
Rfx2P48379 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.93□□□□□ -0.34
Rfx2P48379 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rfx2P48379 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.93□□□□□ -0.34
Rfx2P48379 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Rfx2P48379 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx2P48379 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rfx2P48379 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.92□□□□□ -0.34
Rfx2P48379 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.92□□□□□ -0.34
Rfx2P48379 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rfx2P48379 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.92□□□□□ -0.34
Rfx2P48379 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rfx2P48379 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.92□□□□□ -0.34
Rfx2P48379 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rfx2P48379 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Rfx2P48379 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.92□□□□□ -0.34
Rfx2P48379 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.92□□□□□ -0.34
Rfx2P48379 Rps4l-202ENSMUST00000204242 789 ntBASIC12.92□□□□□ -0.34
Rfx2P48379 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.92□□□□□ -0.34
Rfx2P48379 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.92□□□□□ -0.34
Rfx2P48379 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Rfx2P48379 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rfx2P48379 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfx2P48379 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.92□□□□□ -0.34
Rfx2P48379 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.92□□□□□ -0.34
Rfx2P48379 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.92□□□□□ -0.34
Rfx2P48379 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx2P48379 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx2P48379 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.91□□□□□ -0.34
Rfx2P48379 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx2P48379 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx2P48379 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rfx2P48379 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rfx2P48379 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx2P48379 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.91□□□□□ -0.34
Rfx2P48379 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx2P48379 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Rfx2P48379 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx2P48379 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx2P48379 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rfx2P48379 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Rfx2P48379 Gm14999-201ENSMUST00000121039 624 ntBASIC12.91□□□□□ -0.34
Rfx2P48379 Gm24990-201ENSMUST00000157406 323 ntBASIC12.91□□□□□ -0.34
Rfx2P48379 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.91□□□□□ -0.34
Rfx2P48379 Mir5132-201ENSMUST00000175166 71 ntBASIC12.91□□□□□ -0.34
Rfx2P48379 Gm2260-201ENSMUST00000184965 657 ntBASIC12.91□□□□□ -0.34
Rfx2P48379 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms