Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.5□□□□□ -0.41
Vps4bP46467 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Gm13315-201ENSMUST00000120376 991 ntBASIC12.5□□□□□ -0.41
Vps4bP46467 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.5□□□□□ -0.41
Vps4bP46467 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps4bP46467 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps4bP46467 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.5□□□□□ -0.41
Vps4bP46467 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps4bP46467 Gm6013-201ENSMUST00000212264 699 ntBASIC12.5□□□□□ -0.41
Vps4bP46467 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Gm22058-201ENSMUST00000083393 310 ntBASIC12.5□□□□□ -0.41
Vps4bP46467 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vps4bP46467 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vps4bP46467 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.5□□□□□ -0.41
Vps4bP46467 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Vps4bP46467 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vps4bP46467 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Vps4bP46467 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps4bP46467 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.49□□□□□ -0.41
Vps4bP46467 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vps4bP46467 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps4bP46467 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Vps4bP46467 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.49□□□□□ -0.41
Vps4bP46467 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps4bP46467 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.49□□□□□ -0.41
Vps4bP46467 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.49□□□□□ -0.41
Vps4bP46467 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Vps4bP46467 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps4bP46467 Gm18304-201ENSMUST00000189162 546 ntBASIC12.49□□□□□ -0.41
Vps4bP46467 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Vps4bP46467 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.49□□□□□ -0.41
Vps4bP46467 Gm44405-201ENSMUST00000198952 126 ntBASIC12.49□□□□□ -0.41
Vps4bP46467 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Gm35960-201ENSMUST00000202712 767 ntBASIC12.49□□□□□ -0.41
Vps4bP46467 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.49□□□□□ -0.41
Vps4bP46467 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.49□□□□□ -0.41
Vps4bP46467 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vps4bP46467 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vps4bP46467 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps4bP46467 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps4bP46467 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps4bP46467 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vps4bP46467 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps4bP46467 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vps4bP46467 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps4bP46467 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps4bP46467 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps4bP46467 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps4bP46467 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.48□□□□□ -0.41
Vps4bP46467 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.48□□□□□ -0.41
Vps4bP46467 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps4bP46467 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vps4bP46467 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps4bP46467 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vps4bP46467 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps4bP46467 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Vps4bP46467 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps4bP46467 Gm12314-201ENSMUST00000118104 538 ntBASIC12.48□□□□□ -0.41
Vps4bP46467 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps4bP46467 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.48□□□□□ -0.41
Vps4bP46467 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps4bP46467 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps4bP46467 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.48□□□□□ -0.41
Vps4bP46467 Gm40466-201ENSMUST00000212174 422 ntBASIC12.48□□□□□ -0.41
Vps4bP46467 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.48□□□□□ -0.41
Vps4bP46467 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
Vps4bP46467 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.48□□□□□ -0.41
Vps4bP46467 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps4bP46467 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps4bP46467 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms