Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.66□□□□□ -0.54
Nkx2-6P43688 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.66□□□□□ -0.54
Nkx2-6P43688 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Gm23119-201ENSMUST00000158610 140 ntBASIC11.66□□□□□ -0.54
Nkx2-6P43688 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.66□□□□□ -0.54
Nkx2-6P43688 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Gm43947-201ENSMUST00000203019 959 ntBASIC11.66□□□□□ -0.54
Nkx2-6P43688 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.66□□□□□ -0.54
Nkx2-6P43688 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Gm9996-201ENSMUST00000070359 913 ntBASIC11.66□□□□□ -0.54
Nkx2-6P43688 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.66□□□□□ -0.54
Nkx2-6P43688 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.65□□□□□ -0.54
Nkx2-6P43688 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Gm24231-201ENSMUST00000104315 133 ntBASIC11.65□□□□□ -0.54
Nkx2-6P43688 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Gm27627-201ENSMUST00000183644 150 ntBASIC11.65□□□□□ -0.54
Nkx2-6P43688 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Gm7848-201ENSMUST00000210739 718 ntBASIC11.65□□□□□ -0.54
Nkx2-6P43688 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Matn2-203ENSMUST00000226766 3252 ntBASIC11.65□□□□□ -0.54
Nkx2-6P43688 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-6P43688 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Nkx2-6P43688 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkx2-6P43688 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.65□□□□□ -0.55
Nkx2-6P43688 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.64□□□□□ -0.55
Nkx2-6P43688 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.64□□□□□ -0.55
Nkx2-6P43688 Gm11331-201ENSMUST00000119764 288 ntBASIC11.64□□□□□ -0.55
Nkx2-6P43688 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.64□□□□□ -0.55
Nkx2-6P43688 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.64□□□□□ -0.55
Nkx2-6P43688 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.64□□□□□ -0.55
Nkx2-6P43688 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms