Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl12P40224 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Cxcl12P40224 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm23912-201ENSMUST00000104687 87 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cxcl12P40224 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm15207-201ENSMUST00000119259 442 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm12990-201ENSMUST00000120372 468 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.62□□□□□ -0.39
Cxcl12P40224 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.62□□□□□ -0.39
Cxcl12P40224 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.62□□□□□ -0.39
Cxcl12P40224 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl12P40224 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl12P40224 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cxcl12P40224 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl12P40224 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cxcl12P40224 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.61□□□□□ -0.39
Cxcl12P40224 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cxcl12P40224 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.61□□□□□ -0.39
Cxcl12P40224 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cxcl12P40224 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.61□□□□□ -0.39
Cxcl12P40224 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Gm12783-201ENSMUST00000121425 397 ntBASIC12.61□□□□□ -0.39
Cxcl12P40224 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cxcl12P40224 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.61□□□□□ -0.39
Cxcl12P40224 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.61□□□□□ -0.39
Cxcl12P40224 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.61□□□□□ -0.39
Cxcl12P40224 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cxcl12P40224 Gm5714-201ENSMUST00000197343 566 ntBASIC12.61□□□□□ -0.39
Cxcl12P40224 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.61□□□□□ -0.39
Cxcl12P40224 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.61□□□□□ -0.39
Cxcl12P40224 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.61□□□□□ -0.39
Cxcl12P40224 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cxcl12P40224 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.61□□□□□ -0.39
Cxcl12P40224 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.61□□□□□ -0.39
Cxcl12P40224 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.61□□□□□ -0.39
Cxcl12P40224 Gm4604-201ENSMUST00000025040 390 ntBASIC12.61□□□□□ -0.39
Cxcl12P40224 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cxcl12P40224 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms