Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LdlrP35951 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.26□□□□□ -0.45
LdlrP35951 Gm15808-201ENSMUST00000119046 604 ntBASIC12.26□□□□□ -0.45
LdlrP35951 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.26□□□□□ -0.45
LdlrP35951 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.26□□□□□ -0.45
LdlrP35951 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Gm26083-201ENSMUST00000157904 193 ntBASIC12.26□□□□□ -0.45
LdlrP35951 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.26□□□□□ -0.45
LdlrP35951 Mir3547-201ENSMUST00000175461 88 ntBASIC12.26□□□□□ -0.45
LdlrP35951 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.26□□□□□ -0.45
LdlrP35951 Olfr284-202ENSMUST00000206647 966 ntBASIC12.26□□□□□ -0.45
LdlrP35951 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LdlrP35951 Gm9368-201ENSMUST00000219348 831 ntBASIC12.26□□□□□ -0.45
LdlrP35951 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.26□□□□□ -0.45
LdlrP35951 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Gm10268-201ENSMUST00000085340 555 ntBASIC12.26□□□□□ -0.45
LdlrP35951 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
LdlrP35951 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.26□□□□□ -0.45
LdlrP35951 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.26□□□□□ -0.45
LdlrP35951 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LdlrP35951 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LdlrP35951 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
LdlrP35951 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.25□□□□□ -0.45
LdlrP35951 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
LdlrP35951 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LdlrP35951 Mir877-201ENSMUST00000104738 85 ntBASIC12.25□□□□□ -0.45
LdlrP35951 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.25□□□□□ -0.45
LdlrP35951 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LdlrP35951 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Gm37259-201ENSMUST00000193903 849 ntBASIC12.25□□□□□ -0.45
LdlrP35951 Gm37497-201ENSMUST00000195830 798 ntBASIC12.25□□□□□ -0.45
LdlrP35951 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.25□□□□□ -0.45
LdlrP35951 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
LdlrP35951 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LdlrP35951 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.25□□□□□ -0.45
LdlrP35951 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LdlrP35951 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LdlrP35951 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LdlrP35951 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.24□□□□□ -0.45
LdlrP35951 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Gm26185-201ENSMUST00000157692 266 ntBASIC12.24□□□□□ -0.45
LdlrP35951 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.24□□□□□ -0.45
LdlrP35951 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.24□□□□□ -0.45
LdlrP35951 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
LdlrP35951 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.24□□□□□ -0.45
LdlrP35951 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.24□□□□□ -0.45
LdlrP35951 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
LdlrP35951 Gm45865-201ENSMUST00000211815 945 ntBASIC12.24□□□□□ -0.45
LdlrP35951 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.24□□□□□ -0.45
LdlrP35951 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
LdlrP35951 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms